Curator Dashboard

Multi-purpose SNV calling software enhanced by probabilistic integration of quality scores.

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• SciCrunch
• 12 years ago - by Anonymous

Software for reliable Identification of Genomic Variants Using RNA-seq Data.

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• SciCrunch
• 12 years ago - by Anonymous

Tool designed to generate scaffolds (super contigs of sequences joined by N-bases) using the homology provided by a closely related reference sequence. Scaffold_builder is an advanced wrapper for Nucmer, written in Python that resolves several situations that may arise when mapping contigs to the reference genome.

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• SciCrunch
• 12 years ago - by Anonymous

Sogftware for fast Phylogenetic Scaffolding of Ancient Contigs.

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• SciCrunch
• 12 years ago - by Anonymous

Interactive demonstrations of sensory perception phenomena from Dale Purves' website. You may read the empirical explanations and download high resolution images.

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• SciCrunch
• 14 years ago - by Anonymous

Software for Greedy Clustering of 16S rRNA Reads which uses a dynamic seeding strategy.

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• SciCrunch
• 12 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 9, 2022. Software tool for estimating Species Richness Using 16S rRNA Pyrosequences.

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• SciCrunch
• 12 years ago - by Anonymous

The Alzheimer's Disease Research Center at Emery University maintains an active brain bank to facilitate the acquisition, storage, handling and distribution of well-characterized autopsy brain tissue and other materials to investigators. It contains frozen tissue and brain specimens, formalin fixed tissue, paraformaldehyde fixed tissue, and cryopreserved tissue. The ADRC also has access to tissues and samples related to other neurodegenerative diseases. It contains plasma samples, serum samples, lymphoblast cell lines, and cerebrospinal fluid.

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• SciCrunch
• 14 years ago - by Anonymous

NDRI is a Not-For-Profit (501c3) Corporation dedicated to providing the highest quality human biomaterials for research. NDRI makes it easy for researchers to get the human tissues and organs they need, prepared, preserved and shipped precisely according to their specific scientific protocols, as quickly as possible, and in the largest available quantities. NDRI provides researchers with protocol specific human neurological tissues such as brain stem, spinal cord, and basal ganglia, among others. In addition to control specimens, NDRI recovers tissues from donors with a variety of diseases, including Down syndrome, Parkinsons disease, Alzheimers disease, schizophrenia, and dementia. Through the NDRI 24/7 referral and procurement system, research consented biospecimens can be provided from low post mortem interval donors preserved at 4ºC, frozen or snap frozen, fixed, paraffin embedded, or as unstained slides.

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• SciCrunch
• 15 years ago - by Anonymous

A non-profit organization that facilitates the donation of tissues. It supports healthcare agencies, coroners, medical examiners and funeral professionals through donations and training, as well as partnering with organizations that utilize tissue in medical care and research.

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• SciCrunch
• 15 years ago - by Anonymous

A nonprofit organ procurement agency based in Iowa. The organization facilitates both organ and tissue recovery in cooperation with local hospitals. The network also works to support public education, hospital development and family support services.

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• SciCrunch
• 15 years ago - by Anonymous

A neuroscience PhD program based at Indiana University that focuses on technical skills and the conceptual framework needed to puruse a career of research and/or teaching in neuroscience. Faculty of the neuroscience department fall into one of four areas of research: Molecular and Cellular Neuroscience, Behavioral Neuroscience, Cognitive and Computational Neuroscience and Clinical and Translational Neuroscience.

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• SciCrunch
• 15 years ago - by Anonymous

An archived portal of clinical studies, both ongoing and completed, that have been conducted and supported by the National Eye Institute (NEI) since 1970. The portal covers corneal diseases, glaucoma, epidemiology, lens and cataract, retinal diseases, strabismus, amblyopia and visual processing.

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• SciCrunch
• 14 years ago - by Anonymous

A weekly podcast hosted by Steve Mirsky on topics relating to developments in science and technology through interviews with leading scientists and journalists. This podcast is affiliated with Scientific American.

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• SciCrunch
• 15 years ago - by Anonymous

A program designed for the efficient mapping of sequence reads onto genomic references. The software is capable of reading most sequencing platforms and giving a range of outputs are supported.

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• SciCrunch
• 15 years ago - by Anonymous

A software to provide small tools for common processing tasks for LC/MS data. It is an extension to the metabolomics analysis pipeline mzMatch.R. The software is modular, open source, platform independent and written in Java.

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• SciCrunch
• 11 years ago - by Anonymous

Asterand, Inc., the Detroit-based supplier of human tissue products and services, announces the distribution of eleven breast cancer cell lines, derived at the University of Michigan. The University has agreed to license the marketing of the breast cancer cell lines, known as the SUM lines, through Asterand in an effort to provide an exceptional tool to a broad base of researchers studying the disease. There are an estimated 1.2 million new diagnoses worldwide of breast cancer each year. The cell lines can be used to study all aspects of breast cancer biology, from new drug target identification to cell signaling to effects of novel drugs on cellular proliferation.

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• SciCrunch
• 15 years ago - by Anonymous

Software program that detects the precise break points of Copy number variations (CNVs) through a fuzzy string matching algorithm using both CIGAR and POS information. In case the two break points of a CNV are in repeated regions and the break points are not unique, it reports the range where the break points can slide.

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• SciCrunch
• 12 years ago - by Anonymous

Data analysis service for accurate phylogenetic classification of variable-length DNA fragments.

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• SciCrunch
• 12 years ago - by Anonymous

Project focused on advancing knowledge of prognosis, trial design and treatment in Traumatic Brain Injury. IMPACT has developed and validated prognostic models for classification and characterization of TBI series, and participated in development of standardization of data collection in TBI studies.

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• SciCrunch
• 15 years ago - by Anonymous