Curator Dashboard

Photo-editing software including editing features, fast brushes, creative tools and color selection that will help turn snapshots into beautiful, gallery-worthy images.

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• SciCrunch
• 12 years ago - by Anonymous

Reference-free ddRADseq analysis software tools. The pipeline script generates reference-sorted, indexed BAM from uniqued reads from radtag sequencing lanes.

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• SciCrunch
• 11 years ago - by Anonymous

An organization which promotes studies in biology by conducting research itself as well as in cooperation with other research institutions. This organization covers a wide variety of biological fields, such as cell biology, developmental biology, neurobiology, evolutionary biology and theoretical biology. NIBB also offers graduate education programs through the Graduate University for Advanced Studies (SOKENDAI). This program provides five-year Doctoral courses for university graduates and a three-year senior Doctoral course for those with a Master's degree already.

• Organization
• SciCrunch
• 16 years ago - submitted by

Nonprofit, government-funded research organization dedicated to the enhancement of medical research and the improvement of health care in Taiwan. Research interests include both aspects of basic biomedical sciences and specific diseases such as cancer, mental disorders and infectious diseases. The institute is meant to provide direction to national science and technology development in health and medical care, educate young scientists and physicians, establish an objective and fair system for research, and promoting domestic and international cooperation.

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• SciCrunch
• 13 years ago - submitted by

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 31, 2022. Center focused on the development of computational biological atlases of different populations, subjects, modalities, and spatio-temporal scales with 3 types of resources: (1) Stand-alone computational software tools (image and volume processing, analysis, visualization, graphical workflow environments). (2) Infrastructure Resources (Databases, computational Grid, services). (3) Web-services (web-accessible resources for processing, validation and exploration of multimodal/multichannel data including clinical data, imaging data, genetics data and phenotypic data). The CCB develops novel mathematical, computational, and engineering approaches to map biological form and function in health and disease. CCB computational tools integrate neuroimaging, genetic, clinical, and other relevant data to enable the detailed exploration of distinct spatial and temporal biological characteristics. Generalizable mathematical approaches are developed and deployed using Grid computing to create practical biological atlases that describe spatiotemporal change in biological systems. The efforts of CCB make possible discovery-oriented science and the accumulation of new biological knowledge. The Center has been divided into cores organized as follows: - Core 1 is focused on mathematical and computational research. Core 2 is involved in the development of tools to be used by Core 3. Core 3 is composed of the driving biological projects; Mapping Genomic Function, Mapping Biological Structure, and Mapping Brain Phenotype. - Cores 4 - 7 provide the infrastructure for joint structure within the Center as well as the development of new approaches and procedures to augment the research and development of Cores 1-3. These cores are: (4)Infrastructure and Resources, (5) Education and Training, (6) Dissemination, and (7) Administration and Management. The main focus of the CCB is on the brain, and specifically on neuroimaging. This area has a long tradition of sophisticated mathematical and computational techniques. Nevertheless, new developments in related areas of mathematics and computational science have emerged in recent years, some from related application areas such as Computer Graphics, Computer Vision, and Image Processing, as well as from Computational Mathematics and the Computational Sciences. We are confident that many of these ideas can be applied beneficially to neuroimaging.

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• SciCrunch
• 15 years ago - by Anonymous

A federal grant-making agency supporting research, preservation, public programs, and education in the humanities.

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• SciCrunch
• 14 years ago - submitted by

An organization in the Netherlands which works to create a smart, skilled, and creative environment. This organization also strives to make a good work environment for teachers, artists and researchers.

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• SciCrunch
• 14 years ago - submitted by

THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016.

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• SciCrunch
• 15 years ago - by Anonymous

A military affiliated research institute which focuses on funding and approving new and ongoing programs while ensuring a balanced investment portfolio. This organization is mainly concerned with making investments in technologies that can be used for national security.

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• SciCrunch
• 13 years ago - submitted by

A stem cell bank in Malaysia which provides and carries out long-term human stem cells and tissue cryopreservation and research. The general public can use their biobanking services for personal use.

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• SciCrunch
• 15 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE, documented May 9, 2017.

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• SciCrunch
• 15 years ago - by Anonymous

A university affiliated laboratory which is composed of two main departments, the Center for Organic Photonics and Electronics (COPE) and the Magnetic Resonance Laboratory. COPE creates flexible organic photonic and electronic materials and devices. The Magnetic Resonance Laboratory performs MRI and magnetic bore.

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• SciCrunch
• 13 years ago - by Anonymous

A medical technology company whose research and products revolve around peripheral nerve repair.

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• SciCrunch
• 15 years ago - by Anonymous

Software used for visualizing and graphing data, image processing, and programming. It is designed for use by scientists and engineers and supports large data sets, evenly spaced data, and various data import formats. The software includes a suite of image processing operations for image filtering, manipulation, and quantification and is completely programmable.

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• SciCrunch
• 12 years ago - by Anonymous

Software tools for processing RAD Sequencing Illumina reads. Version 1.0 is a pipeline for transforming Illumina reads into candidate genetic markers.

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• SciCrunch
• 11 years ago - by Anonymous

This resource provides information on: -- a definition of social anxiety disorder (social phobia) -- practical examples of what life is like for people with social phobia, -- an invitation to join a free moderated mailing list edited specifically for people with social phobia (social anxiety disorder)

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• SciCrunch
• 16 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE, documented on 8/12/13. An expanded version of the Alternative Splicing Annotation Project (ASAP) database with a new interface and integration of comparative features using UCSC BLASTZ multiple alignments. It supports 9 vertebrate species, 4 insects, and nematodes, and provides with extensive alternative splicing analysis and their splicing variants. As for human alternative splicing data, newly added EST libraries were classified and included into previous tissue and cancer classification, and lists of tissue and cancer (normal) specific alternatively spliced genes are re-calculated and updated. They have created a novel orthologous exon and intron databases and their splice variants based on multiple alignment among several species. These orthologous exon and intron database can give more comprehensive homologous gene information than protein similarity based method. Furthermore, splice junction and exon identity among species can be valuable resources to elucidate species-specific genes. ASAP II database can be easily integrated with pygr (unpublished, the Python Graph Database Framework for Bioinformatics) and its powerful features such as graph query, multi-genome alignment query and etc. ASAP II can be searched by several different criteria such as gene symbol, gene name and ID (UniGene, GenBank etc.). The web interface provides 7 different kinds of views: (I) user query, UniGene annotation, orthologous genes and genome browsers; (II) genome alignment; (III) exons and orthologous exons; (IV) introns and orthologous introns; (V) alternative splicing; (IV) isoform and protein sequences; (VII) tissue and cancer vs. normal specificity. ASAP II shows genome alignments of isoforms, exons, and introns in UCSC-like genome browser. All alternative splicing relationships with supporting evidence information, types of alternative splicing patterns, and inclusion rate for skipped exons are listed in separate tables. Users can also search human data for tissue- and cancer-specific splice forms at the bottom of the gene summary page. The p-values for tissue-specificity as log-odds (LOD) scores, and highlight the results for LOD >= 3 and at least 3 EST sequences are all also reported.

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• SciCrunch
• 16 years ago - by Anonymous

A fully automatic array image analysis software which can process single or multiple array images. Koadarray automatically finds the spot locations within each image and quantifies the spot intensity data. It can be used in conjunction with radioactive applications, macroarray applications, fluorescent microarray image analysis and fluorescent microplate images.

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• SciCrunch
• 12 years ago - by Anonymous

Software R package to test association between methylation at CpG sites across genome and phenotype of interest, adjusting for any relevant covariates. Can perform standard analyses of large datasets without need to manually input data. Can handle mixed effects models with chip or batch entering model as random intercept. Includes tools to apply quality control filters, perform permutation tests, and create QQ plots, manhattan plots, and scatterplots for individual CpG sites.

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• SciCrunch
• 12 years ago - by Anonymous

A software tool for annotating biomedical investigations and the resulting data, then producing a MAGE-TAB file. This software is a standalone desktop which features: an editor function, an annotation modifier, incorporation of terms from biomedical ontologies, standard templates for common experiment types, a design aid to help create a new document, and a validator that checks for syntactic and semantic violations.

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• SciCrunch
• 12 years ago - by Anonymous