Curator Dashboard

Core facility that provides the following services: Flow cytometry assay service, Data management system. <BR/> <BR/>The BD FACSCalibur system combines unique dual-laser technology, an automated sample loader option, and powerful software to provide the high throughput necessary to meet productivity requirements of clinical laboratories. The modularity and innovative technology designed into the BD FACSCalibur system also offers investigators the performance and flexibility required for a variety of research applications. <b>Please note that since the NERCE program will end in February 2014, our ability to support new requests for services is limited.b>

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A Java application programming interface (API) for the Human Proteome Organisation (HUPO) Proteomics Standards Initiative (PSI) mzIdentML standard for peptide and protein identification data.

• Resource
• SciCrunch
• 11 years ago - by Anonymous

A laboratory equipped with laser-based flow cytometric instruments, the main one being the Becton Dickinson two-laser FACScalibur analyzer. This facility provides a resource for analytical and preparative studies of cells using flow cytometry to the FAMU biomedical researchers. This facility offers FACS acquisition and analysis for detecting cell surface or intracellular proteins, measuring apoptosis, cell cycle, cellular physiology that have both biomedical and clinical applications.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A core facility at the Florida Agricultural and Mechanical University.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Core facility that provides the following services: Optical cellular imaging, Microscopy training. A Norris Cotton Cancer Center Shared Resource Facility. The Optical Cellular Imaging Shared Resource strives to provide reliable and affordable access to point scanning confocal microscopy, conventional bright field and fluorescence light microscopy, and image analysis resources. The facility provides individual and group training for operation of the light microscopes. Training is intended to provide an understanding of the basic light microscopy and digital imaging principles involved. Training for our microscope use and imaging consultation is open to all members of Dartmouth College, DMS, DHMC, and outside users.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. A resource to develop shared resources for the implementation of geospatial analysis for cancer research at Dartmouth. Their goal is to provide expert consultation and collaboration for research projects of NCCC members in behavior, epidemiology, and health services research. The GeoSpatial Resource also strives to educate members of the community in different aspects of geospatial analysis by providing courses through TDI and at Dartmouth College.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Supports Dartmouth Cancer Center investigators in design, performance, data analysis, and interpretation of pharmacology objectives in preclinical, clinical and epidemiological studies.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Core facility that provides the following services: Tissue trimming, cassetting, processing, and embedding, Cutting and staining of paraffin-embedded and cryostat sections, Immunohistochemistry for both routine and novel markers, In situ hybridization, using chromogenic or radioactive detection methods, Laser capture microdissection. <BR/> <BR/>Tissue analysis is critical to validation and evaluation of animal models of human cancer, and human cancer tissues serve as the operating system for translational research. The facility supports a wide spectrum of cancer-relevant research, from basic studies on pathogenic mechanisms in cancer to translational research focused on the development of new tests for biomarkers that stratify patients and direct therapy. The Specialized Histopathology (SHP) Core, was created in 2005 by consolidating five histopathology cores into a single unit with two performance sites: Longwood, Directed by Jon Aster and based at the Brigham and Women?s Hospital and MGH, Directed by Anat Stemmer-Rachamimov and based at Massachusetts General Hospital East in Charlestown. The SHP Core provides professional and technical research pathology services to DF/HCC investigators working in diverse organisms (e.g., rodents, fish, and monkeys) or human tissues. The Core also assists in experimental design and the development and interpretation of tests and their results. As of July 2012, the Longwood site offers CLIA Certified services.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Core facility that provides the following services: Website development and hosting for research labs and studies requiring an online presence, interactive functionality, or site traffic tracking. <BR/> <BR/>The Health Communication Core offers a full range of creative communication services to support evidence-based recruitment and retention of study participants and intervention research. HCC serves researchers from diverse disciplines who need websites, logos, brochures, social media campaigns, publications, and interactive media targeted to the needs and preferences of specific audiences.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

An applied research and education program at Children's Hospital in Boston. The program focuses on work done at the intersection of information science, health care and biomedical discovery. The field is inherently interdisciplinary, drawing on traditional biomedical disciplines, the science and technology of computing, data science, biostatistics, epidemiology, decision sciences, population health, omics, implementation science, and health care policy and management. This program's faculty are trained in medicine, data science, computer science, mathematics and epidemiology.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A laboratory dedicated to advancing health care through utilizing computation and imaging to new areas of medicine.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A collection of functions with batch functionality for SPM: * user entered expression (one set of volumes); * binarize non-zero voxels; * binarize/threshold each image; * binarize non-zero voxels, sum, rebinarize; * voxelwise calculations on pairs (add sub mult div ... etc.); * flip sign of all non-zero voxels; * x-flip image along y = 0; * mask images to a template; * T-to-Z transform; * Winsorize (cap) extreme values; * Z-score transform of image relative to its global mean and SD; * write single voxels to a .nii; * create a cluster image; * split cluster image into constituent images; * write hemisphere masks from template; * homotopic calculations; * replace zeros with __; * pad image with extra voxels;

• Resource
• SciCrunch
• 12 years ago - by Anonymous

APIs for Net Station data files. APIs are available for C++, C#, and Java.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Commercial company that produces simple EEG measurement devices compatible with phones.Develops proprietary non invasive brain monitors and advanced machine learning algorithms to detect constellation of biomarkers of pathologies in asymptomatic individuals, such as people with neurodegeneration, adverse drug side effects or brain cancer, and to ascertain intent including individuals who cannot otherwise communicate.

• Resource
• SciCrunch
• 15 years ago - by Anonymous

An instrumental supplier which provides researchers and clinicians with sophisticated All-in-One solutions in the field of neuroscience.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A platform-independent desktop tool for inspecting DICOM header fields, editing DICOM header fields, viewing DICOM images, and transferring DICOM files to a DICOM receiver. DicomBrowser includes scriptable header editing to support various de-identification protocols. DicomBrowser is written in Java and uses ImageJ for image viewing and the dcm4che toolkit for much of its DICOM implementation.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

An R-based package to conduct brain connectivity analyses with a focus on a novel approach to conducting Connectome-Wide Association Studies (CWAS) using functional connectivity.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A configurable, open-source, Nipype-based, automated processing pipeline for resting state functional MRI (R-fMRI) data, for use by both novice and expert users. C-PAC was designed to bring the power, flexibility and elegance of the Nipype platform to users in a plug and play fashion?without requiring the ability to program. Using an easy to read, text-editable configuration file, C-PAC can rapidly orchestrate automated R-fMRI processing procedures, including: - quality assurance measurements - image preprocessing based upon user specified preferences - generation of functional connectivity maps (e.g., correlation analyses) - customizable extraction of time-series data - generation of local R-fMRI metrics (e.g., regional homogeneity, voxel-matched homotopic connectivity, fALFF/ALFF) C-PAC makes it possible to use a single configuration file to launch a factorial number of pipelines differing with respect to specific processing steps.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A software package for segmentation of structures using automated neual networks. This is the reference implementation using NAMIC software development best practices and the Insight Toolkit of the paper Registration and machine learning-based automated segmentation of subcortical and cerebellar brain structures. (PMID: 17904870). The program uses the Slicer3 execution model framework to define the command line arguments and can be fully integrated with Slicer3 using the module discovery capabilities of Slicer3.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

An I/O library for Matlab/Octave Matlab and Octave library for reading and writing Nifti-1 files. cbiNifti is intended to be a small, self-contained library that makes minimal assumptions about what Nifti files should look like and allow users easy access to the raw data. cbiNifti handles compressed file formats for reading and writing, using Unix pipes for compression and decompression. More information and code examples at: http://www.pc.rhul.ac.uk/staff/J.Larsson/software.html

• Resource
• SciCrunch
• 12 years ago - by Anonymous